Index

B

BagelFitter (class in src.BagelFitter)

best_torus (src.BagelFitter.BagelFitter attribute)

C

calculate_dice_coefficient() (src.BagelFitter.BagelFitter method) contains_point() (src.Torus.Torus method)

contains_point2() (src.Torus.Torus method) create_blank_density_map() (src.BagelFitter.BagelFitter method)

D

distance() (src.Torus.Torus method) dmap (src.BagelFitter.BagelFitter attribute) (src.Torus.Torus attribute)

dmap_out (src.BagelFitter.BagelFitter attribute) dmap_out_binary_flag (src.BagelFitter.BagelFitter attribute)

E

eps (src.Torus.Torus attribute) examples.examples module

extension (src.Torus.Torus attribute)

F

fill_binary_density() (src.BagelFitter.BagelFitter method) fill_nonbinary_density() (src.BagelFitter.BagelFitter method)

fit_binary_torus() (src.BagelFitter.BagelFitter method) fit_nonbinary_torus() (src.BagelFitter.BagelFitter method)

G

generate_bestfit_torus_map() (in module examples.examples)

generate_binary_torus() (src.BagelFitter.BagelFitter method) generate_binary_torus_map() (in module examples.examples)

I

input_map_path (src.BagelFitter.BagelFitter attribute)

L

load_exprimental_map() (src.BagelFitter.BagelFitter method)

M

module examples.examples src.BagelFitter src.Torus version

P

plot_voxel_values() (src.BagelFitter.BagelFitter method)

R

R (src.Torus.Torus attribute)

r (src.Torus.Torus attribute)

S

score_torus_map_with_experimental_map() (in module examples.examples) score_torus_maps() (src.BagelFitter.BagelFitter method) src.BagelFitter module

src.Torus module

T

thickness (src.Torus.Torus attribute)

Torus (class in src.Torus)

V

version module

voxel_size (src.BagelFitter.BagelFitter attribute)

W

write_torusmap_to_file() (src.BagelFitter.BagelFitter method)