BagelFit

• BagelFitter
  • BagelFitter Class
    • BagelFitter
      • BagelFitter.best_torus
      • BagelFitter.dmap
      • BagelFitter.dmap_out
      • BagelFitter.dmap_out_binary_flag
      • BagelFitter.input_map_path
      • BagelFitter.voxel_size
      • BagelFitter.calculate_dice_coefficient()
      • BagelFitter.create_blank_density_map()
      • BagelFitter.fill_binary_density()
      • BagelFitter.fill_nonbinary_density()
      • BagelFitter.fit_binary_torus()
      • BagelFitter.fit_nonbinary_torus()
      • BagelFitter.generate_binary_torus()
      • BagelFitter.load_exprimental_map()
      • BagelFitter.plot_voxel_values()
      • BagelFitter.score_torus_maps()
      • BagelFitter.write_torusmap_to_file()
  • Torus Class
    • Torus
      • Torus.R
      • Torus.r
      • Torus.thickness
      • Torus.extension
      • Torus.eps
      • Torus.dmap
      • Torus.contains_point()
      • Torus.contains_point2()
      • Torus.distance()
• Examples
  • examples
    • generate_bestfit_torus_map()
    • generate_binary_torus_map()
    • score_torus_map_with_experimental_map()

version

This function provides the BagelFit version number